Publications

Nature 2026Accepted

Persistent neuronal stress signaling underlies phenotypes in a mouse model of Angelman syndrome

Kim KS, Gardner C, Cullen A, Stelzer JA, Cho K, Sharma A, Nemera MT, Law T, Naz H, Zhao G, Gabel HW, Patti GJ, Musiek ES, Ahn TH, Yi JJ

IEEE Access, 14: 37702–37718 2026

Wavelet-Enhanced PaDiM for Industrial Anomaly Detection

Gardner C, Dhiren A, Min B, Ahn TH

DOI

Briefings in Bioinformatics, 26(2): bbaf176 2025

Bioinformatic approaches to blood and tissue microbiome analyses: challenges and perspectives

Sirasani JP*, Gardner C*, Jung G, Lee H, Ahn TH (* Co-first authors)

DOI

Genome Research, 34(11): 2133–2146 2024

Chromosome-level subgenome-aware de novo assembly provides insight into Saccharomyces bayanus genome divergence after hybridization

Gardner C, Chen J, Hadfield C, Lu Z, Debruin D, Zhan Y, Donlin MJ, et al.

DOI

Genes, 12(10): 1616 2021

Novel Candidate Genes Differentially Expressed in Glyphosate-Treated Horseweed (Conyza canadensis)

Yang Y, Gardner C, Gupta P, Peng Y, Piasecki C, Millwood RJ, Ahn TH, Stewart CN Jr

DOI

SC'26 WORKS Workshop 2026Accepted

HPC-CARLA: Closed-Loop Evaluation of Autonomous Driving Agents as a Resilient, Schedulable HPC Workload

Kang J, Jung S, Kim K, Gardner C, Yeom JS, Ahn TH, Kim J

Proceedings of the SC'25 Workshops of the International Conference for High Performance Computing, Networking, Storage and Analysis, 349–358 2025Best Paper Runner-Up

Evaluating Accuracy and Performance Tradeoffs in GPU Accelerated Single Cell RNA-seq Analysis

Gardner C, Jeong S, Khatavkar O, Moon A, Cao Q, Ahn TH

DOI

bioRxiv 2026In revision at Scientific Data

First Metagenome-Assembled Genomes from the Historic Morrow Plots Reveal Management-Associated Dominance of Archaeal Ammonia Oxidizers

Nguyen VD, Gao C, Gardner C, Wang Z, Margenot AJ, Huang L, Ahn TH

bioRxiv

12th Annual Greater Chicago Area Systems Research Workshop (GCASR) 2025

Memory-Efficient Anomaly Detection for Heterogeneous Computing Systems

Gardner C, Min B, Ahn TH

CAMDA Conference (ISMB) 2020Best Presentation Award

Metagenomic Data Analysis with Probability-Based Reduced Dataset Representation

Gardner C, Ahmad S, Ahn TH